马来西亚理科大学有三个校区，如下院系提供硕士和博士课程：
★主校区Main Campus(槟州的槟城岛)：
艺术学院School of Arts
生物科学系School of Biological Sciences
化学系School of Chemical Sciences
传媒系School of Communication
计算机系School of Computer Sciences
远程教育学院School of Distance Eucation
教育学院School of Eucational Stuies
住房，建筑和规划学院School of Housing,Builing an Planning
人类学院School of Humanities
产业科技学院School of Inustrial Technology
管理学院School of Management
数学系School of Mathematical Sciences
药学系School of Pharmaceutical Sciences
物理系School of Physics
社会科学院School of Social Sciences
语言，文学和翻译学院School of Languages,Literacies an Translation
研究生院School of Grauate Stuies
★工程校区 Engeenering Campus (NibongTebal:Penang槟城)：
航空和航天工程学院School of Aerospace Engineering
化学工程院School of Chemical Engineering
土木工程学院School of Civil Engineering
电气和电子工程School of Electrical&Electronic Engineering
机械工程学院School of Mechanical Engineering
材料与矿产资源工程School of Materials&Mineral Resources Engineering
★医学校区Health Campus(Kelantan吉兰丹州)：
牙医学院School of Dental Sciences
卫生科学院School of Health Sciences
医学院School of Meical Sciences
